Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS01990 | Not Available | Negative | 204534 - 205088 | 20291.8 |
| hypothetical protein | YT1_RS01995 | Not Available | Negative | 205568 - 206116 | 19265.0 |
| hypothetical protein | YT1_RS02000 | Not Available | Negative | 206139 - 206495 | 12485.3 |
| mobf family relaxase | YT1_RS02005 | Not Available | Positive | 206746 - 210282 | 126221.0 |
| hypothetical protein | YT1_RS02010 | Not Available | Negative | 210321 - 210680 | 13142.5 |
| is3 family transposase | YT1_RS02015 | Not Available | Positive | 210706 - 211979 | 47831.2 |
| helix-turn-helix transcriptional regulator | YT1_RS02020 | Not Available | Positive | 212014 - 212450 | 14281.6 |
| multicopper oxidase family protein | YT1_RS02025 | Not Available | Negative | 213052 - 214542 | 53139.7 |
| shoct domain-containing protein | YT1_RS27445 | Not Available | Negative | 214539 - 214811 | 9657.55 |
| duf4038 domain-containing protein | YT1_RS02030 | Not Available | Negative | 215432 - 216868 | 52031.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


