Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminobutyrate--2-oxoglutarate transaminase | YT1_RS12150 | Not Available | Negative | 2378048 - 2379328 | 46367.0 |
| diaminobutyrate acetyltransferase | YT1_RS12155 | Not Available | Negative | 2379372 - 2379911 | 19741.1 |
| recq family atp-dependent dna helicase | YT1_RS12160 | Not Available | Negative | 2380053 - 2382155 | 75760.5 |
| acetyl-coa hydrolase/transferase family protein | YT1_RS12165 | Not Available | Positive | 2382560 - 2384113 | 55882.5 |
| duf3515 domain-containing protein | YT1_RS12170 | Not Available | Negative | 2384137 - 2384733 | 20153.8 |
| thiamine-phosphate kinase | YT1_RS12175 | Not Available | Positive | 2384824 - 2385789 | 31754.6 |
| gamma carbonic anhydrase family protein | YT1_RS12180 | Not Available | Positive | 2385800 - 2386321 | 17809.3 |
| uracil-dna glycosylase | YT1_RS12185 | Not Available | Positive | 2386340 - 2387017 | 24023.7 |
| enoyl-coa hydratase-related protein | YT1_RS12190 | Not Available | Negative | 2387086 - 2387877 | 27105.4 |
| 50s ribosomal protein l28 | YT1_RS12195 | Not Available | Negative | 2388082 - 2388273 | 6763.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


