Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | YT1_RS01945 | Not Available | Negative | 194301 - 195443 | 38884.4 |
| isochorismatase family protein | YT1_RS01950 | Not Available | Negative | 195549 - 196208 | 24058.6 |
| abc transporter permease | YT1_RS01955 | Not Available | Negative | 196257 - 197057 | 27626.6 |
| abc transporter permease | YT1_RS01960 | Not Available | Negative | 197054 - 197845 | 28629.5 |
| abc transporter atp-binding protein | YT1_RS01965 | Not Available | Negative | 197845 - 198654 | 29835.9 |
| abc transporter substrate-binding protein | YT1_RS01970 | Not Available | Negative | 198669 - 199673 | 35020.9 |
| transposase | YT1_RS27550 | Not Available | Negative | 200032 - 200775 | 27623.3 |
| transposase family protein | YT1_RS27555 | Not Available | Negative | 200690 - 201355 | 24140.1 |
| duf3800 domain-containing protein | YT1_RS01980 | Not Available | Negative | 202816 - 203532 | 27067.6 |
| hypothetical protein | YT1_RS01985 | Not Available | Positive | 203751 - 204320 | 19786.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


