Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase n | YT1_RS11855 | Not Available | Negative | 2314173 - 2316755 | 94454.2 |
| nad(p)/fad-dependent oxidoreductase | YT1_RS11860 | Not Available | Negative | 2316818 - 2318062 | 43916.2 |
| dsba family protein | YT1_RS11865 | Not Available | Positive | 2318202 - 2318822 | 22900.9 |
| ribose-5-phosphate isomerase | YT1_RS11870 | Not Available | Positive | 2318907 - 2319386 | 17055.9 |
| fpg/nei family dna glycosylase | YT1_RS11875 | Not Available | Positive | 2319407 - 2320204 | 29355.5 |
| hypothetical protein | YT1_RS11880 | Not Available | Negative | 2320201 - 2320992 | 27397.8 |
| wax ester/triacylglycerol synthase domain-containing protein | YT1_RS11885 | Not Available | Negative | 2321043 - 2322416 | 50072.2 |
| sulfite exporter taue/safe family protein | YT1_RS11890 | Not Available | Negative | 2322584 - 2323462 | 29213.9 |
| rhodanese-like domain-containing protein | YT1_RS11895 | Not Available | Negative | 2323465 - 2324064 | 21416.7 |
| mbl fold metallo-hydrolase | YT1_RS11900 | Not Available | Positive | 2324322 - 2325701 | 48875.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


