Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | YT1_RS11755 | Not Available | Positive | 2291080 - 2291949 | 32109.4 |
| vwa domain-containing protein | YT1_RS11760 | Not Available | Positive | 2291946 - 2293160 | 44153.7 |
| cytochrome c oxidase assembly protein | YT1_RS11765 | Not Available | Positive | 2293192 - 2295225 | 71353.5 |
| tryptophan-rich sensory protein | YT1_RS11770 | Not Available | Negative | 2295222 - 2296079 | 29010.6 |
| alpha/beta hydrolase family protein | YT1_RS11775 | Not Available | Positive | 2296193 - 2297320 | 39127.2 |
| duf2716 domain-containing protein | YT1_RS11780 | Not Available | Negative | 2297577 - 2298122 | 20792.3 |
| hypothetical protein | YT1_RS11785 | Not Available | Negative | 2298202 - 2298558 | 13577.7 |
| srpbcc family protein | YT1_RS11790 | Not Available | Positive | 2298783 - 2299673 | 32211.7 |
| alpha/beta hydrolase family protein | YT1_RS11795 | Not Available | Positive | 2299843 - 2300925 | 38305.5 |
| lipase family protein | YT1_RS11800 | Not Available | Positive | 2301005 - 2302141 | 39422.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


