Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS27230 | Not Available | Negative | 2282793 - 2282972 | 6644.77 |
| hypothetical protein | YT1_RS27235 | Not Available | Negative | 2283493 - 2283996 | 18749.9 |
| duf3800 domain-containing protein | YT1_RS11725 | Not Available | Positive | 2284164 - 2284919 | 28741.2 |
| hypothetical protein | YT1_RS27240 | Not Available | Negative | 2285112 - 2285276 | 5743.83 |
| hypothetical protein | YT1_RS27245 | Not Available | Negative | 2285688 - 2285858 | 5791.13 |
| Trna-arg | Not Available | Not Available | Positive | 2286144 - 2286220 | Not Available |
| fad binding domain-containing protein | YT1_RS11735 | Not Available | Positive | 2286380 - 2287261 | 31532.5 |
| (2fe-2s)-binding protein | YT1_RS11740 | Not Available | Positive | 2287266 - 2287745 | 17230.6 |
| aerobic carbon-monoxide dehydrogenase large subunit | YT1_RS11745 | Not Available | Positive | 2287742 - 2290138 | 86054.8 |
| xdhc family protein | YT1_RS11750 | Not Available | Positive | 2290167 - 2291054 | 30592.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


