Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate permease | YT1_RS11635 | Not Available | Positive | 2263752 - 2265410 | 57158.2 |
| fad-binding oxidoreductase | YT1_RS11640 | Not Available | Positive | 2265407 - 2266798 | 47632.2 |
| heavy metal translocating p-type atpase | YT1_RS11645 | Not Available | Positive | 2266919 - 2269261 | 81388.0 |
| hypothetical protein | YT1_RS11650 | Not Available | Negative | 2269334 - 2269918 | 21517.9 |
| hypothetical protein | YT1_RS11655 | Not Available | Negative | 2269905 - 2270423 | 17848.9 |
| trehalose-phosphatase | YT1_RS11660 | Not Available | Negative | 2270590 - 2273841 | 120915.0 |
| hypothetical protein | YT1_RS11665 | Not Available | Negative | 2273984 - 2274265 | 9607.54 |
| hypothetical protein | YT1_RS27215 | Not Available | Negative | 2274394 - 2274561 | 5694.71 |
| nudix domain-containing protein | YT1_RS11670 | Not Available | Positive | 2274667 - 2275188 | 18689.9 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS11675 | Not Available | Positive | 2275185 - 2276054 | 31408.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


