Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS27830 | Not Available | Negative | 2255246 - 2255368 | 4623.45 |
| hypothetical protein | YT1_RS11590 | Not Available | Negative | 2255598 - 2256074 | 17512.8 |
| sgnh/gdsl hydrolase family protein | YT1_RS11595 | Not Available | Negative | 2256161 - 2257084 | 31388.5 |
| alpha/beta fold hydrolase | YT1_RS11600 | Not Available | Negative | 2257107 - 2257946 | 30401.7 |
| tetr family transcriptional regulator | YT1_RS11605 | Not Available | Negative | 2257970 - 2258611 | 23660.8 |
| ferredoxin reductase | YT1_RS11610 | Not Available | Positive | 2258767 - 2259879 | 39143.3 |
| fatty acid desaturase family protein | YT1_RS11615 | Not Available | Positive | 2259906 - 2261099 | 44863.9 |
| hypothetical protein | YT1_RS11620 | Not Available | Positive | 2261113 - 2261346 | 8160.4 |
| nadp-specific glutamate dehydrogenase | YT1_RS11625 | Not Available | Negative | 2261435 - 2262778 | 48526.3 |
| gntr family transcriptional regulator | YT1_RS11630 | Not Available | Negative | 2262916 - 2263599 | 24169.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


