Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | YT1_RS11535 | Not Available | Positive | 2244781 - 2245923 | 39993.7 |
| selenium-binding protein sbp56-related protein | YT1_RS11540 | Not Available | Positive | 2246173 - 2247606 | 51635.1 |
| Trna-his | Not Available | Not Available | Positive | 2247762 - 2247837 | Not Available |
| oligoribonuclease | YT1_RS11550 | Not Available | Negative | 2247922 - 2248521 | 22038.3 |
| mycolate reductase | YT1_RS11555 | Not Available | Negative | 2248678 - 2249481 | 27949.8 |
| fad-dependent oxidoreductase | YT1_RS11560 | Not Available | Negative | 2249508 - 2251535 | 73297.0 |
| padr family transcriptional regulator | YT1_RS11565 | Not Available | Negative | 2251532 - 2252077 | 20525.4 |
| mfs transporter | YT1_RS11570 | Not Available | Positive | 2252242 - 2253576 | 46644.3 |
| acyl-coa thioesterase | YT1_RS11575 | Not Available | Negative | 2253561 - 2254382 | 30211.3 |
| tetr/acrr family transcriptional regulator | YT1_RS11580 | Not Available | Positive | 2254478 - 2255128 | 22278.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


