Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | YT1_RS01895 | Not Available | Positive | 185197 - 185952 | 26555.4 |
| mfs transporter | YT1_RS01900 | Not Available | Positive | 186581 - 187732 | 38852.0 |
| iclr family transcriptional regulator | YT1_RS01905 | Not Available | Negative | 187777 - 188568 | 28942.7 |
| class ii aldolase/adducin family protein | YT1_RS01910 | Not Available | Negative | 188624 - 189373 | 26480.9 |
| nad(p)/fad-dependent oxidoreductase | YT1_RS01915 | Not Available | Negative | 189370 - 190605 | 44188.5 |
| ferredoxin | YT1_RS01920 | Not Available | Negative | 190602 - 190799 | 6871.05 |
| hypothetical protein | YT1_RS01925 | Not Available | Negative | 190848 - 191153 | 11476.6 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | YT1_RS01930 | Not Available | Negative | 191150 - 191761 | 22997.9 |
| rieske 2fe-2s domain-containing protein | YT1_RS01935 | Not Available | Negative | 191764 - 193227 | 54904.7 |
| aldo/keto reductase | YT1_RS01940 | Not Available | Negative | 193366 - 194232 | 31895.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


