Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acetyltransferase | YT1_RS11195 | Not Available | Positive | 2177972 - 2179162 | 39971.8 |
| duf3817 domain-containing protein | YT1_RS11200 | Not Available | Positive | 2179259 - 2179630 | 13328.5 |
| tetratricopeptide repeat protein | YT1_RS11205 | Not Available | Positive | 2179727 - 2180620 | 30888.5 |
| metallopeptidase | YT1_RS11210 | Not Available | Negative | 2180703 - 2182142 | 50294.4 |
| 1,4-alpha-glucan branching protein glgb | YT1_RS11215 | Not Available | Negative | 2182174 - 2184372 | 81566.5 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | YT1_RS11220 | Not Available | Negative | 2184369 - 2186411 | 75623.3 |
| alpha-glucan family phosphorylase | YT1_RS11225 | Not Available | Positive | 2186760 - 2189339 | 95021.4 |
| tetr/acrr family transcriptional regulator | YT1_RS11230 | Not Available | Negative | 2189347 - 2189916 | 20492.3 |
| alpha/beta fold hydrolase | YT1_RS11235 | Not Available | Positive | 2190009 - 2190932 | 34257.2 |
| hpp family protein | YT1_RS11240 | Not Available | Positive | 2190913 - 2191419 | 15764.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


