Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS11095 | Not Available | Positive | 2157321 - 2157788 | 15938.1 |
| f0f1 atp synthase subunit a | YT1_RS11100 | Not Available | Positive | 2158048 - 2158896 | 31170.2 |
| atp synthase f0 subunit c | YT1_RS11105 | Not Available | Positive | 2158986 - 2159237 | 8294.41 |
| f0f1 atp synthase subunit b | YT1_RS11110 | Not Available | Positive | 2159248 - 2159808 | 20415.2 |
| f0f1 atp synthase subunit delta | YT1_RS11115 | Not Available | Positive | 2159814 - 2160653 | 28902.2 |
| f0f1 atp synthase subunit alpha | YT1_RS11120 | Not Available | Positive | 2160718 - 2162361 | 58369.1 |
| f0f1 atp synthase subunit gamma | YT1_RS11125 | Not Available | Positive | 2162410 - 2163393 | 35075.6 |
| f0f1 atp synthase subunit beta | YT1_RS11130 | Not Available | Positive | 2163398 - 2164849 | 52000.3 |
| f0f1 atp synthase subunit epsilon | YT1_RS11135 | Not Available | Positive | 2164856 - 2165221 | 12570.9 |
| duf2550 domain-containing protein | YT1_RS11140 | Not Available | Positive | 2165268 - 2165690 | 15335.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


