Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine dehydrogenase | YT1_RS11045 | Not Available | Positive | 2146596 - 2147906 | 45699.5 |
| threonine synthase | YT1_RS11050 | Not Available | Positive | 2147903 - 2148997 | 37663.2 |
| homoserine kinase | YT1_RS11055 | Not Available | Positive | 2149033 - 2149962 | 31777.9 |
| transcription termination factor rho | YT1_RS11060 | Not Available | Positive | 2150318 - 2152282 | 70367.6 |
| 50s ribosomal protein l31 | YT1_RS11065 | Not Available | Positive | 2152423 - 2152656 | 8315.85 |
| peptide chain release factor 1 | YT1_RS11070 | Not Available | Positive | 2152767 - 2153846 | 38893.4 |
| hypothetical protein | YT1_RS11075 | Not Available | Negative | 2153870 - 2154340 | 15881.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | YT1_RS11080 | Not Available | Positive | 2154466 - 2155386 | 32811.6 |
| l-threonylcarbamoyladenylate synthase | YT1_RS11085 | Not Available | Positive | 2155423 - 2156085 | 22878.3 |
| mray family glycosyltransferase | YT1_RS11090 | Not Available | Positive | 2156104 - 2157309 | 42047.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


