Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| limonene-1,2-epoxide hydrolase family protein | YT1_RS10955 | Not Available | Positive | 2128821 - 2129201 | 13825.4 |
| mfs transporter | YT1_RS10960 | Not Available | Positive | 2129350 - 2130519 | 37745.7 |
| tyrosine-type recombinase/integrase | YT1_RS10965 | Not Available | Positive | 2130843 - 2131973 | 41725.1 |
| hypothetical protein | YT1_RS27180 | Not Available | Positive | 2131970 - 2132374 | 15428.1 |
| helix-turn-helix transcriptional regulator | YT1_RS10970 | Not Available | Positive | 2132484 - 2132687 | 7257.84 |
| hypothetical protein | YT1_RS10975 | Not Available | Positive | 2132974 - 2133477 | 17407.9 |
| duf3631 domain-containing protein | YT1_RS10980 | Not Available | Positive | 2133478 - 2134659 | 42532.5 |
| whib family transcriptional regulator | YT1_RS10985 | Not Available | Positive | 2134813 - 2135115 | 10949.1 |
| hypothetical protein | YT1_RS27185 | Not Available | Positive | 2135112 - 2135285 | 6511.66 |
| hypothetical protein | YT1_RS10990 | Not Available | Positive | 2135285 - 2135608 | 11540.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


