Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | YT1_RS10905 | Not Available | Negative | 2118312 - 2118839 | 19153.0 |
| protein-tyrosine-phosphatase | YT1_RS10910 | Not Available | Positive | 2119017 - 2119562 | 18535.2 |
| sulfotransferase family protein | YT1_RS10915 | Not Available | Negative | 2119547 - 2120695 | 43120.7 |
| sdr family oxidoreductase | YT1_RS10920 | Not Available | Negative | 2120755 - 2121555 | 28380.9 |
| hypothetical protein | YT1_RS10925 | Not Available | Negative | 2121552 - 2122718 | 42576.8 |
| iclr family transcriptional regulator | YT1_RS10930 | Not Available | Positive | 2122802 - 2123716 | 32187.8 |
| sulfate adenylyltransferase subunit cysd | YT1_RS10935 | Not Available | Positive | 2123896 - 2124813 | 34706.2 |
| adenylyl-sulfate kinase | YT1_RS10940 | Not Available | Positive | 2124813 - 2126648 | 66210.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | YT1_RS10945 | Not Available | Positive | 2126645 - 2127760 | 39758.0 |
| mbl fold metallo-hydrolase | YT1_RS10950 | Not Available | Positive | 2127812 - 2128807 | 36525.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


