Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent fmn reductase | YT1_RS10805 | Not Available | Positive | 2097200 - 2097823 | 22640.6 |
| mfs transporter | YT1_RS10810 | Not Available | Negative | 2097820 - 2099001 | 39520.6 |
| dihydrolipoamide acetyltransferase family protein | YT1_RS10815 | Not Available | Negative | 2099023 - 2100291 | 43536.7 |
| alpha-ketoacid dehydrogenase subunit beta | YT1_RS10820 | Not Available | Negative | 2100302 - 2101285 | 35362.2 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | YT1_RS10825 | Not Available | Negative | 2101282 - 2102385 | 39977.7 |
| lrp/asnc family transcriptional regulator | YT1_RS10830 | Not Available | Positive | 2102553 - 2103023 | 17136.8 |
| thiolase family protein | YT1_RS10835 | Not Available | Negative | 2103140 - 2104312 | 40140.5 |
| acyl-coa thioesterase | YT1_RS10840 | Not Available | Negative | 2104406 - 2104882 | 17466.7 |
| benzoate/h(+) symporter bene family transporter | YT1_RS10845 | Not Available | Negative | 2104879 - 2106060 | 39210.4 |
| sulfurtransferase | YT1_RS10850 | Not Available | Positive | 2106148 - 2106984 | 29399.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


