Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS10760 | Not Available | Positive | 2090333 - 2090650 | 11815.9 |
| type 1 glutamine amidotransferase-like domain-containing protein | YT1_RS10765 | Not Available | Negative | 2090673 - 2091296 | 21968.0 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | YT1_RS10770 | Not Available | Negative | 2091308 - 2092180 | 31214.2 |
| hit family protein | YT1_RS10775 | Not Available | Negative | 2092177 - 2092617 | 15898.1 |
| sir2 family nad-dependent protein deacylase | YT1_RS10780 | Not Available | Negative | 2092622 - 2093392 | 27472.5 |
| hypothetical protein | YT1_RS27175 | Not Available | Negative | 2093397 - 2093567 | 5966.0 |
| duf488 domain-containing protein | YT1_RS10785 | Not Available | Negative | 2093564 - 2093929 | 13777.1 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | YT1_RS10790 | Not Available | Positive | 2094189 - 2095301 | 38127.8 |
| nad(p) transhydrogenase subunit alpha | YT1_RS10795 | Not Available | Positive | 2095302 - 2095649 | 11936.1 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | YT1_RS10800 | Not Available | Positive | 2095646 - 2097076 | 49059.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


