Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | YT1_RS10710 | Not Available | Positive | 2080714 - 2081448 | 26266.1 |
| sterol desaturase family protein | YT1_RS10715 | Not Available | Positive | 2081445 - 2082116 | 25411.0 |
| duf2945 domain-containing protein | YT1_RS10720 | Not Available | Positive | 2082240 - 2082449 | 7874.2 |
| mgmt family protein | YT1_RS10725 | Not Available | Positive | 2082471 - 2082749 | 9876.92 |
| hypothetical protein | YT1_RS10730 | Not Available | Negative | 2082989 - 2083639 | 22201.3 |
| hypothetical protein | YT1_RS10735 | Not Available | Positive | 2084096 - 2085226 | 39071.3 |
| ftsw/roda/spove family cell cycle protein | YT1_RS10740 | Not Available | Positive | 2085245 - 2088079 | 98396.6 |
| rod shape-determining protein | YT1_RS10745 | Not Available | Negative | 2088080 - 2089069 | 34334.6 |
| gnat family n-acetyltransferase | YT1_RS10750 | Not Available | Negative | 2089242 - 2089520 | 10381.9 |
| hypothetical protein | YT1_RS10755 | Not Available | Negative | 2089683 - 2090204 | 18310.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


