Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS10605 | Not Available | Positive | 2055677 - 2056144 | 16406.7 |
| chorismate mutase | YT1_RS10610 | Not Available | Negative | 2056219 - 2056515 | 10834.9 |
| hypothetical protein | YT1_RS10615 | Not Available | Positive | 2056889 - 2057740 | 31052.8 |
| thiolase family protein | YT1_RS10620 | Not Available | Positive | 2057855 - 2059039 | 40748.8 |
| long-chain-fatty-acid--coa ligase | YT1_RS10625 | Not Available | Negative | 2059103 - 2060659 | 55865.9 |
| hypothetical protein | YT1_RS10630 | Not Available | Negative | 2060773 - 2062047 | 44184.7 |
| marr family winged helix-turn-helix transcriptional regulator | YT1_RS10640 | Not Available | Positive | 2062541 - 2063035 | 18406.5 |
| amp-dependent synthetase/ligase | YT1_RS10645 | Not Available | Positive | 2063028 - 2064818 | 64324.1 |
| 4-alpha-glucanotransferase | YT1_RS10650 | Not Available | Negative | 2064862 - 2066988 | 78349.2 |
| response regulator | YT1_RS10655 | Not Available | Negative | 2067037 - 2067702 | 23642.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


