Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | YT1_RS10565 | Not Available | Negative | 2045959 - 2046639 | 23965.4 |
| serine hydrolase domain-containing protein | YT1_RS10570 | Not Available | Negative | 2046696 - 2047820 | 39916.9 |
| hypothetical protein | YT1_RS27165 | Not Available | Negative | 2047950 - 2048135 | 6759.62 |
| duf5994 family protein | YT1_RS10575 | Not Available | Negative | 2048125 - 2048577 | 16317.3 |
| polyphosphate kinase 2 | YT1_RS10580 | Not Available | Positive | 2048768 - 2049715 | 36757.5 |
| hypothetical protein | YT1_RS27170 | Not Available | Positive | 2049851 - 2050021 | 6274.91 |
| helix-turn-helix transcriptional regulator | YT1_RS10585 | Not Available | Positive | 2050055 - 2050743 | 24736.0 |
| elongation factor g-like protein ef-g2 | YT1_RS10590 | Not Available | Negative | 2050757 - 2052844 | 73576.1 |
| alpha/beta hydrolase | YT1_RS10595 | Not Available | Positive | 2052994 - 2054067 | 37542.8 |
| aldehyde dehydrogenase family protein | YT1_RS10600 | Not Available | Positive | 2054164 - 2055588 | 49995.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


