Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | YT1_RS10305 | Not Available | Positive | 1983234 - 1984016 | 28172.1 |
| duf1214 domain-containing protein | YT1_RS10310 | Not Available | Positive | 1984134 - 1985078 | 34429.1 |
| stealth family protein | YT1_RS10315 | Not Available | Negative | 1985150 - 1986640 | 56801.2 |
| hypothetical protein | YT1_RS10320 | Not Available | Negative | 1986928 - 1987710 | 28283.0 |
| hypothetical protein | YT1_RS10325 | Not Available | Negative | 1987703 - 1989976 | 80516.0 |
| hypothetical protein | YT1_RS10330 | Not Available | Negative | 1989973 - 1990320 | 12276.5 |
| duf3322 domain-containing protein | YT1_RS10335 | Not Available | Negative | 1990386 - 1991522 | 41124.2 |
| atp-binding protein | YT1_RS10340 | Not Available | Negative | 1991519 - 1994818 | 122023.0 |
| duf4194 domain-containing protein | YT1_RS10345 | Not Available | Negative | 1994815 - 1995414 | 22597.9 |
| duf3375 domain-containing protein | YT1_RS10350 | Not Available | Negative | 1995411 - 1996922 | 55567.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


