Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thif family adenylyltransferase | YT1_RS01795 | Not Available | Positive | 160405 - 161871 | 52976.7 |
| mov34/mpn/pad-1 family protein | YT1_RS01800 | Not Available | Positive | 161868 - 163157 | 46686.1 |
| is1380 family transposase | YT1_RS01805 | Not Available | Positive | 163271 - 164617 | 48960.2 |
| saved domain-containing protein | YT1_RS01810 | Not Available | Positive | 164749 - 165306 | 20243.2 |
| helix-turn-helix transcriptional regulator | YT1_RS01815 | Not Available | Negative | 165747 - 166073 | 11533.8 |
| is21 family transposase | YT1_RS01820 | Not Available | Positive | 166241 - 167800 | 57510.3 |
| atp-binding protein | YT1_RS01825 | Not Available | Positive | 167797 - 168540 | 28147.9 |
| atp-binding protein | YT1_RS01830 | Not Available | Negative | 168657 - 169193 | 19351.1 |
| is21 family transposase | YT1_RS01835 | Not Available | Negative | 169193 - 170761 | 56870.6 |
| n-6 dna methylase | YT1_RS01840 | Not Available | Negative | 170933 - 174034 | 114200.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


