Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiesterase | YT1_RS10205 | Not Available | Positive | 1962303 - 1963223 | 32890.7 |
| dioxygenase | YT1_RS10210 | Not Available | Negative | 1963250 - 1964185 | 34146.9 |
| maleylacetate reductase | YT1_RS10215 | Not Available | Negative | 1964188 - 1965276 | 37191.6 |
| fad-dependent oxidoreductase | YT1_RS10220 | Not Available | Negative | 1965280 - 1967079 | 65610.7 |
| maoc family dehydratase | YT1_RS10225 | Not Available | Negative | 1967114 - 1967566 | 16535.4 |
| class i adenylate-forming enzyme family protein | YT1_RS10230 | Not Available | Negative | 1967563 - 1969146 | 57035.5 |
| fad-dependent monooxygenase | YT1_RS10235 | Not Available | Negative | 1969172 - 1970419 | 44571.1 |
| iclr family transcriptional regulator | YT1_RS10240 | Not Available | Positive | 1970621 - 1971418 | 27829.5 |
| tetr/acrr family transcriptional regulator | YT1_RS10245 | Not Available | Positive | 1971447 - 1972070 | 22291.4 |
| helix-turn-helix domain-containing protein | YT1_RS10250 | Not Available | Negative | 1972100 - 1973743 | 58746.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


