Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gyri-like domain-containing protein | YT1_RS10110 | Not Available | Positive | 1937764 - 1938216 | 16110.4 |
| acyl-coa thioester hydrolase/baat c-terminal domain-containing protein | YT1_RS10115 | Not Available | Positive | 1938270 - 1940117 | 64976.7 |
| hypothetical protein | YT1_RS10120 | Not Available | Positive | 1940188 - 1941366 | 43097.0 |
| hypothetical protein | YT1_RS10125 | Not Available | Positive | 1941498 - 1941965 | 16161.5 |
| zinc-dependent alcohol dehydrogenase family protein | YT1_RS10130 | Not Available | Positive | 1942081 - 1943133 | 36740.1 |
| hypothetical protein | YT1_RS10135 | Not Available | Positive | 1943133 - 1943699 | 20278.1 |
| hypothetical protein | YT1_RS27155 | Not Available | Positive | 1943925 - 1946084 | 78180.5 |
| pd-(d/e)xk nuclease family protein | YT1_RS10145 | Not Available | Positive | 1946255 - 1949077 | 102688.0 |
| uvrd-helicase domain-containing protein | YT1_RS10150 | Not Available | Positive | 1949074 - 1952280 | 117500.0 |
| patatin-like phospholipase family protein | YT1_RS10155 | Not Available | Negative | 1952297 - 1953517 | 42894.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


