Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maleylpyruvate isomerase family mycothiol-dependent enzyme | YT1_RS10060 | Not Available | Positive | 1922635 - 1923351 | 26066.0 |
| excalibur calcium-binding domain-containing protein | YT1_RS10065 | Not Available | Negative | 1923440 - 1923796 | 11808.9 |
| hypothetical protein | YT1_RS10070 | Not Available | Positive | 1924000 - 1924362 | 13009.9 |
| response regulator transcription factor | YT1_RS10075 | Not Available | Negative | 1924420 - 1925085 | 24356.3 |
| sensor histidine kinase | YT1_RS10080 | Not Available | Negative | 1925082 - 1926557 | 52481.2 |
| hypothetical protein | YT1_RS10085 | Not Available | Negative | 1926567 - 1926890 | 11234.6 |
| alpha/beta fold hydrolase | YT1_RS10090 | Not Available | Positive | 1926969 - 1927745 | 27854.0 |
| 3-oxoacyl-acp synthase iii family protein | YT1_RS10095 | Not Available | Negative | 1927831 - 1929696 | 68306.1 |
| 3-oxoacyl-acp reductase family protein | YT1_RS10100 | Not Available | Negative | 1929747 - 1930580 | 29128.6 |
| carboxyl transferase domain-containing protein | YT1_RS10105 | Not Available | Negative | 1931472 - 1936955 | 198518.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


