Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | YT1_RS09960 | Not Available | Positive | 1900013 - 1901194 | 43104.7 |
| caib/baif coa transferase family protein | YT1_RS09965 | Not Available | Positive | 1901269 - 1902408 | 40197.9 |
| benzaldehyde dehydrogenase | YT1_RS09970 | Not Available | Positive | 1902710 - 1904170 | 50235.8 |
| mfs transporter | YT1_RS09975 | Not Available | Positive | 1904222 - 1905547 | 46353.3 |
| lysr family transcriptional regulator | YT1_RS09980 | Not Available | Positive | 1905769 - 1906704 | 33421.2 |
| mfs transporter | YT1_RS09985 | Not Available | Positive | 1906839 - 1908179 | 46526.9 |
| fad-dependent monooxygenase | YT1_RS09990 | Not Available | Positive | 1908183 - 1910108 | 69026.6 |
| alpha/beta hydrolase | YT1_RS09995 | Not Available | Negative | 1910168 - 1911187 | 35828.2 |
| flavodoxin domain-containing protein | YT1_RS10000 | Not Available | Negative | 1911609 - 1912139 | 19085.8 |
| alpha/beta fold hydrolase | YT1_RS10005 | Not Available | Negative | 1912197 - 1913045 | 30391.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


