Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS09910 | Not Available | Positive | 1889094 - 1889285 | 6404.19 |
| helix-turn-helix transcriptional regulator | YT1_RS09915 | Not Available | Positive | 1889455 - 1889697 | 8471.1 |
| type ii toxin-antitoxin system hipa family toxin | YT1_RS09920 | Not Available | Positive | 1889703 - 1890938 | 44366.3 |
| hypothetical protein | YT1_RS09925 | Not Available | Positive | 1891044 - 1893128 | 74589.1 |
| nerd domain-containing protein | YT1_RS09930 | Not Available | Positive | 1893133 - 1894788 | 61849.3 |
| hypothetical protein | YT1_RS09935 | Not Available | Positive | 1894785 - 1895408 | 21918.2 |
| hypothetical protein | YT1_RS09940 | Not Available | Positive | 1895421 - 1896416 | 34935.3 |
| lysr substrate-binding domain-containing protein | YT1_RS09945 | Not Available | Positive | 1896451 - 1897374 | 33238.5 |
| acyl-coa dehydrogenase family protein | YT1_RS09950 | Not Available | Positive | 1897579 - 1898766 | 42833.3 |
| caib/baif coa transferase family protein | YT1_RS09955 | Not Available | Positive | 1898763 - 1900016 | 44451.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


