Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS09860 | Not Available | Negative | 1877142 - 1877741 | 20155.2 |
| deoxyribonuclease iv | YT1_RS09865 | Not Available | Negative | 1877789 - 1878559 | 27571.5 |
| abc transporter atp-binding protein | YT1_RS09870 | Not Available | Positive | 1878687 - 1879445 | 26892.0 |
| abc transporter permease | YT1_RS09875 | Not Available | Positive | 1879459 - 1881981 | 86263.4 |
| alpha/beta hydrolase | YT1_RS09880 | Not Available | Positive | 1882165 - 1883748 | 54868.9 |
| hypothetical protein | YT1_RS09885 | Not Available | Positive | 1883745 - 1884230 | 16715.1 |
| hypothetical protein | YT1_RS09890 | Not Available | Positive | 1884353 - 1885327 | 32325.5 |
| glycerate kinase | YT1_RS09895 | Not Available | Negative | 1885352 - 1886329 | 32576.5 |
| hydroxymethylglutaryl-coa lyase | YT1_RS09900 | Not Available | Negative | 1886311 - 1887249 | 32391.7 |
| caib/baif coa transferase family protein | YT1_RS09905 | Not Available | Negative | 1887276 - 1888502 | 44463.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


