Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyltransferase | YT1_RS09810 | Not Available | Negative | 1866839 - 1867468 | 22313.8 |
| hypothetical protein | YT1_RS09815 | Not Available | Negative | 1867532 - 1867963 | 15380.8 |
| trpb-like pyridoxal phosphate-dependent enzyme | YT1_RS09820 | Not Available | Negative | 1868110 - 1869384 | 44857.9 |
| tetr/acrr family transcriptional regulator | YT1_RS09825 | Not Available | Positive | 1869506 - 1870078 | 19668.5 |
| sdr family oxidoreductase | YT1_RS09830 | Not Available | Positive | 1870075 - 1871115 | 36609.2 |
| dead/deah box helicase | YT1_RS09835 | Not Available | Positive | 1871186 - 1873096 | 69816.7 |
| duf1206 domain-containing protein | YT1_RS09840 | Not Available | Negative | 1873143 - 1873946 | 27216.5 |
| duf664 domain-containing protein | YT1_RS09845 | Not Available | Negative | 1874056 - 1874571 | 18546.8 |
| abc transporter atp-binding protein | YT1_RS09850 | Not Available | Negative | 1874568 - 1876469 | 68290.4 |
| ppox class f420-dependent oxidoreductase | YT1_RS09855 | Not Available | Positive | 1876671 - 1877132 | 17160.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


