Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | YT1_RS09760 | Not Available | Positive | 1855717 - 1856514 | 27484.8 |
| class i adenylate-forming enzyme family protein | YT1_RS09765 | Not Available | Positive | 1856581 - 1857636 | 37006.1 |
| crotonase/enoyl-coa hydratase family protein | YT1_RS09770 | Not Available | Positive | 1857731 - 1858492 | 26061.3 |
| adenosine deaminase | YT1_RS09775 | Not Available | Positive | 1858521 - 1859444 | 33756.9 |
| d-arabinono-1,4-lactone oxidase | YT1_RS09780 | Not Available | Negative | 1859466 - 1860791 | 48380.3 |
| tetr/acrr family transcriptional regulator | YT1_RS09785 | Not Available | Positive | 1860869 - 1861513 | 23137.8 |
| amino acid deaminase/aldolase | YT1_RS09790 | Not Available | Positive | 1861584 - 1862759 | 41324.9 |
| duf2252 domain-containing protein | YT1_RS09795 | Not Available | Negative | 1862761 - 1864110 | 49761.1 |
| alpha/beta hydrolase | YT1_RS09800 | Not Available | Positive | 1864143 - 1864787 | 22759.2 |
| amp-dependent synthetase/ligase | YT1_RS09805 | Not Available | Negative | 1864878 - 1866680 | 64259.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


