Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | YT1_RS09710 | Not Available | Negative | 1843508 - 1847308 | 133561.0 |
| abc transporter permease | YT1_RS09715 | Not Available | Negative | 1847470 - 1848255 | 26817.2 |
| abc transporter atp-binding protein | YT1_RS09720 | Not Available | Negative | 1848252 - 1849352 | 38495.2 |
| alpha/beta fold hydrolase | YT1_RS09725 | Not Available | Negative | 1849393 - 1850232 | 29672.9 |
| hypothetical protein | YT1_RS09730 | Not Available | Negative | 1850234 - 1850983 | 25882.2 |
| arac family transcriptional regulator | YT1_RS09735 | Not Available | Positive | 1851101 - 1851958 | 30800.7 |
| voc family protein | YT1_RS09740 | Not Available | Positive | 1851955 - 1852356 | 13871.3 |
| glutathione s-transferase family protein | YT1_RS09745 | Not Available | Negative | 1852364 - 1853380 | 37711.0 |
| gnat family n-acetyltransferase | YT1_RS09750 | Not Available | Negative | 1853416 - 1854189 | 26966.8 |
| dha2 family efflux mfs transporter permease subunit | YT1_RS09755 | Not Available | Positive | 1854228 - 1855706 | 51198.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


