Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium/cobalt transporter cora | YT1_RS09660 | Not Available | Negative | 1830340 - 1831407 | 39710.7 |
| php domain-containing protein | YT1_RS09665 | Not Available | Positive | 1831520 - 1832374 | 29993.6 |
| hypothetical protein | YT1_RS09670 | Not Available | Positive | 1832371 - 1832793 | 14715.4 |
| nadp-dependent malic enzyme | YT1_RS09675 | Not Available | Positive | 1833239 - 1834432 | 41037.2 |
| glycine betaine abc transporter substrate-binding protein | YT1_RS09680 | Not Available | Positive | 1834530 - 1835465 | 31825.1 |
| alpha/beta hydrolase | YT1_RS09685 | Not Available | Negative | 1835424 - 1836341 | 32074.4 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS09690 | Not Available | Negative | 1836352 - 1837179 | 29444.1 |
| flavin-containing monooxygenase | YT1_RS09695 | Not Available | Negative | 1837176 - 1838759 | 58045.7 |
| tetr/acrr family transcriptional regulator | YT1_RS09700 | Not Available | Positive | 1838830 - 1839498 | 24559.3 |
| multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit | YT1_RS09705 | Not Available | Negative | 1839582 - 1843400 | 139437.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


