Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | YT1_RS09610 | Not Available | Positive | 1818723 - 1819559 | 29935.3 |
| abc transporter atp-binding protein | YT1_RS09615 | Not Available | Positive | 1819565 - 1820734 | 42417.8 |
| hypothetical protein | YT1_RS09620 | Not Available | Positive | 1820757 - 1821566 | 29294.2 |
| mfs transporter | YT1_RS09625 | Not Available | Negative | 1821628 - 1823136 | 51638.1 |
| winged helix dna-binding domain-containing protein | YT1_RS09630 | Not Available | Positive | 1823260 - 1824366 | 40184.5 |
| duf1360 domain-containing protein | YT1_RS09635 | Not Available | Positive | 1824451 - 1824987 | 19345.3 |
| recq family atp-dependent dna helicase | YT1_RS09640 | Not Available | Negative | 1825104 - 1826801 | 62052.5 |
| parb n-terminal domain-containing protein | YT1_RS09645 | Not Available | Negative | 1826984 - 1827829 | 32685.0 |
| suppressor of fused domain protein | YT1_RS09650 | Not Available | Positive | 1827924 - 1828511 | 20862.2 |
| hypothetical protein | YT1_RS09655 | Not Available | Negative | 1828538 - 1830349 | 63705.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


