Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase protein tatb | YT1_RS09560 | Not Available | Positive | 1809090 - 1809470 | 13648.4 |
| mrp/nbp35 family atp-binding protein | YT1_RS09565 | Not Available | Negative | 1809541 - 1810674 | 39625.0 |
| lytic transglycosylase domain-containing protein | YT1_RS09570 | Not Available | Negative | 1810700 - 1811578 | 29970.3 |
| hypothetical protein | YT1_RS09575 | Not Available | Negative | 1811737 - 1812771 | 34004.4 |
| duf1003 domain-containing protein | YT1_RS09580 | Not Available | Negative | 1812860 - 1813387 | 19747.6 |
| magnesium transporter mgte n-terminal domain-containing protein | YT1_RS09585 | Not Available | Negative | 1813380 - 1814654 | 46306.6 |
| hpch/hpai aldolase/citrate lyase family protein | YT1_RS09590 | Not Available | Positive | 1814713 - 1815669 | 34385.0 |
| general stress protein | YT1_RS09595 | Not Available | Positive | 1815802 - 1816290 | 17151.8 |
| abc transporter substrate-binding protein | YT1_RS09600 | Not Available | Positive | 1816427 - 1817761 | 47100.1 |
| carbohydrate abc transporter permease | YT1_RS09605 | Not Available | Positive | 1817839 - 1818723 | 31909.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


