Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4a-hydroxytetrahydrobiopterin dehydratase | YT1_RS09370 | Not Available | Negative | 1768979 - 1769266 | 10158.8 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | YT1_RS09375 | Not Available | Positive | 1769292 - 1769696 | 14474.4 |
| hypothetical protein | YT1_RS27145 | Not Available | Negative | 1769712 - 1769888 | 6634.67 |
| translational gtpase typa | YT1_RS09380 | Not Available | Positive | 1770246 - 1772132 | 68045.4 |
| abc transporter family substrate-binding protein | YT1_RS09385 | Not Available | Positive | 1772217 - 1774064 | 63304.9 |
| n-acetyl-1-d-myo-inositol-2-amino-2-deoxy-alpha- d-glucopyranoside deacetylase | YT1_RS09390 | Not Available | Positive | 1774061 - 1774948 | 31264.6 |
| hypothetical protein | YT1_RS27150 | Not Available | Positive | 1774999 - 1775157 | 5898.96 |
| hypothetical protein | YT1_RS09395 | Not Available | Positive | 1775210 - 1775647 | 14933.7 |
| uracil-dna glycosylase | YT1_RS09400 | Not Available | Negative | 1775610 - 1776347 | 26416.5 |
| ph domain-containing protein | YT1_RS09405 | Not Available | Negative | 1776344 - 1777897 | 54796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


