Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS27815 | Not Available | Positive | 1734426 - 1734551 | 4469.43 |
| iclr family transcriptional regulator | YT1_RS09180 | Not Available | Positive | 1734764 - 1735591 | 29541.5 |
| 2-keto-4-pentenoate hydratase | YT1_RS09185 | Not Available | Positive | 1735636 - 1736430 | 27598.3 |
| 2-keto-4-pentenoate hydratase | YT1_RS09190 | Not Available | Positive | 1736427 - 1737215 | 27482.8 |
| tautomerase family protein | YT1_RS09195 | Not Available | Positive | 1737218 - 1737415 | 7250.74 |
| acyl-coa dehydrogenase family protein | YT1_RS09200 | Not Available | Positive | 1737547 - 1738812 | 44793.0 |
| arac family transcriptional regulator | YT1_RS09205 | Not Available | Negative | 1738883 - 1739890 | 36412.2 |
| cytochrome p450 | YT1_RS09210 | Not Available | Positive | 1740023 - 1741237 | 44849.9 |
| 2fe-2s iron-sulfur cluster-binding protein | YT1_RS09215 | Not Available | Positive | 1741240 - 1742211 | 35366.0 |
| is3 family transposase | YT1_RS09220 | Not Available | Negative | 1742153 - 1743573 | 52518.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


