Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS09035 | Not Available | Positive | 1699042 - 1699260 | 7070.75 |
| hypothetical protein | YT1_RS27620 | Not Available | Positive | 1699342 - 1699665 | 11282.7 |
| dict sensory domain-containing protein | YT1_RS09040 | Not Available | Positive | 1699678 - 1700565 | 31678.6 |
| fad-binding oxidoreductase | YT1_RS09045 | Not Available | Negative | 1700552 - 1702174 | 57136.5 |
| alkaline phosphatase d family protein | YT1_RS09050 | Not Available | Negative | 1702200 - 1703855 | 61817.7 |
| hypothetical protein | YT1_RS09055 | Not Available | Positive | 1704048 - 1704278 | 8197.16 |
| srpbcc family protein | YT1_RS09060 | Not Available | Negative | 1704322 - 1704804 | 18279.1 |
| arsr/smtb family transcription factor | YT1_RS09065 | Not Available | Negative | 1704801 - 1705133 | 12485.1 |
| duf2505 domain-containing protein | YT1_RS09070 | Not Available | Positive | 1705200 - 1705697 | 17989.5 |
| exodeoxyribonuclease v subunit gamma | YT1_RS09075 | Not Available | Positive | 1705812 - 1709105 | 119353.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


