Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mycothiol conjugate amidase mca | YT1_RS08835 | Not Available | Positive | 1655934 - 1656812 | 33088.2 |
| hypothetical protein | YT1_RS08840 | Not Available | Positive | 1656809 - 1657084 | 9639.62 |
| thioredoxin domain-containing protein | YT1_RS08845 | Not Available | Positive | 1657095 - 1659122 | 71991.6 |
| mechanosensitive ion channel family protein | YT1_RS08850 | Not Available | Negative | 1659135 - 1660049 | 32998.3 |
| paqr family membrane homeostasis protein trha | YT1_RS08855 | Not Available | Negative | 1660112 - 1660780 | 24252.2 |
| isoprenyl transferase | YT1_RS08860 | Not Available | Positive | 1660940 - 1661707 | 28802.1 |
| type i pantothenate kinase | YT1_RS08865 | Not Available | Negative | 1661769 - 1662701 | 35559.9 |
| hypothetical protein | YT1_RS08870 | Not Available | Positive | 1662874 - 1664076 | 44890.0 |
| serine hydroxymethyltransferase | YT1_RS08875 | Not Available | Positive | 1664175 - 1665470 | 45950.9 |
| phoh family protein | YT1_RS08880 | Not Available | Positive | 1665800 - 1667092 | 46595.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


