Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase | YT1_RS08785 | Not Available | Negative | 1643150 - 1646644 | 127412.0 |
| hypothetical protein | YT1_RS08790 | Not Available | Positive | 1646806 - 1647165 | 12020.7 |
| class i sam-dependent methyltransferase | YT1_RS08795 | Not Available | Positive | 1647159 - 1648304 | 39845.6 |
| bax inhibitor-1/ycca family protein | YT1_RS08800 | Not Available | Positive | 1648400 - 1649251 | 29732.6 |
| sgnh/gdsl hydrolase family protein | YT1_RS08805 | Not Available | Negative | 1649248 - 1650210 | 32604.3 |
| cystathionine beta-synthase | YT1_RS08810 | Not Available | Positive | 1650326 - 1651711 | 48231.2 |
| cystathionine gamma-synthase | YT1_RS08815 | Not Available | Positive | 1651792 - 1652946 | 40617.1 |
| bifunctional lytic transglycosylase/c40 family peptidase | YT1_RS08820 | Not Available | Positive | 1653145 - 1654542 | 47293.3 |
| transcription elongation factor grea | YT1_RS08825 | Not Available | Negative | 1654630 - 1655124 | 18039.9 |
| duf4307 domain-containing protein | YT1_RS08830 | Not Available | Negative | 1655348 - 1655779 | 15742.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


