Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS27130 | Not Available | Positive | 1637316 - 1637486 | 5961.08 |
| hypothetical protein | YT1_RS08750 | Not Available | Negative | 1637518 - 1637697 | 7014.94 |
| hypothetical protein | YT1_RS27135 | Not Available | Negative | 1637812 - 1637964 | 5334.69 |
| helix-turn-helix transcriptional regulator | YT1_RS08755 | Not Available | Negative | 1638019 - 1638418 | 14618.2 |
| type 1 glutamine amidotransferase domain-containing protein | YT1_RS08760 | Not Available | Negative | 1638453 - 1639154 | 25132.3 |
| hypothetical protein | YT1_RS27140 | Not Available | Negative | 1639486 - 1639629 | 5102.72 |
| duf4389 domain-containing protein | YT1_RS08765 | Not Available | Positive | 1639989 - 1641485 | 54809.8 |
| csbd family protein | YT1_RS08770 | Not Available | Negative | 1641558 - 1641755 | 6764.76 |
| hypothetical protein | YT1_RS08775 | Not Available | Positive | 1641866 - 1642057 | 7184.04 |
| magnesium transporter cora family protein | YT1_RS08780 | Not Available | Negative | 1642089 - 1643105 | 38171.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


