Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | YT1_RS08500 | Not Available | Negative | 1578705 - 1579934 | 40331.8 |
| class i sam-dependent methyltransferase | YT1_RS08505 | Not Available | Positive | 1579989 - 1580630 | 23236.9 |
| luxr c-terminal-related transcriptional regulator | YT1_RS08510 | Not Available | Negative | 1580741 - 1583302 | 91078.0 |
| hypothetical protein | YT1_RS08515 | Not Available | Negative | 1583535 - 1584188 | 23964.6 |
| duf2461 domain-containing protein | YT1_RS08520 | Not Available | Negative | 1584382 - 1585011 | 23301.5 |
| ribose-phosphate diphosphokinase | YT1_RS08525 | Not Available | Negative | 1585065 - 1586045 | 35655.7 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | YT1_RS08530 | Not Available | Negative | 1586042 - 1587520 | 51624.9 |
| Trna-gln | Not Available | Not Available | Positive | 1587592 - 1587663 | Not Available |
| tetr/acrr family transcriptional regulator | YT1_RS08540 | Not Available | Positive | 1587900 - 1588493 | 21819.0 |
| scbr family autoregulator-binding transcription factor | YT1_RS08545 | Not Available | Positive | 1588653 - 1589288 | 23296.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


