Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | YT1_RS08450 | Not Available | Negative | 1567626 - 1568198 | 20539.8 |
| 50s ribosomal protein l25/general stress protein ctc | YT1_RS08455 | Not Available | Negative | 1568302 - 1568907 | 20953.7 |
| fad-dependent oxidoreductase | YT1_RS08460 | Not Available | Negative | 1569113 - 1570582 | 51150.7 |
| aminotransferase class v-fold plp-dependent enzyme | YT1_RS08465 | Not Available | Negative | 1570671 - 1571849 | 42009.0 |
| apc family permease | YT1_RS08470 | Not Available | Positive | 1571895 - 1573136 | 41951.8 |
| ergothioneine biosynthesis glutamate--cysteine ligase egta | YT1_RS08475 | Not Available | Positive | 1573216 - 1574448 | 43761.3 |
| ergothioneine biosynthesis protein egtb | YT1_RS08480 | Not Available | Positive | 1574445 - 1575740 | 48275.5 |
| ergothioneine biosynthesis protein egtc | YT1_RS08485 | Not Available | Positive | 1575733 - 1576479 | 27066.3 |
| l-histidine n(alpha)-methyltransferase | YT1_RS08490 | Not Available | Positive | 1576476 - 1577432 | 35292.8 |
| mfs transporter | YT1_RS08495 | Not Available | Positive | 1577504 - 1578700 | 40199.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


