Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | YT1_RS08400 | Not Available | Positive | 1556218 - 1558014 | 65355.0 |
| enoyl-coa hydratase-related protein | YT1_RS08405 | Not Available | Negative | 1558115 - 1558909 | 27176.7 |
| hypothetical protein | YT1_RS08410 | Not Available | Negative | 1558906 - 1560420 | 52116.4 |
| tetr/acrr family transcriptional regulator | YT1_RS08415 | Not Available | Positive | 1560512 - 1561135 | 22813.6 |
| nuclear transport factor 2 family protein | YT1_RS08420 | Not Available | Positive | 1561233 - 1561712 | 18249.3 |
| voc family protein | YT1_RS08425 | Not Available | Positive | 1561757 - 1562203 | 15845.8 |
| enoyl-coa hydratase/isomerase family protein | YT1_RS08430 | Not Available | Positive | 1562287 - 1563324 | 36826.6 |
| hypothetical protein | YT1_RS08435 | Not Available | Negative | 1563420 - 1563953 | 18047.8 |
| peptide chain release factor 3 | YT1_RS08440 | Not Available | Negative | 1564058 - 1565680 | 59089.4 |
| fatty acyl-amp ligase | YT1_RS08445 | Not Available | Positive | 1565946 - 1567580 | 57779.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


