Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | YT1_RS08305 | Not Available | Positive | 1532646 - 1533506 | 29849.7 |
| alanine/glycine:cation symporter family protein | YT1_RS08310 | Not Available | Positive | 1533540 - 1534934 | 49089.4 |
| aaa family atpase | YT1_RS08315 | Not Available | Positive | 1535318 - 1539301 | 140730.0 |
| aminodeoxychorismate synthase component i | YT1_RS08320 | Not Available | Negative | 1539240 - 1540538 | 45124.6 |
| rna polymerase sigma-70 factor | YT1_RS08325 | Not Available | Negative | 1540589 - 1541509 | 33624.4 |
| nad(p)/fad-dependent oxidoreductase | YT1_RS08330 | Not Available | Negative | 1541506 - 1542651 | 38880.8 |
| duf2786 domain-containing protein | YT1_RS08335 | Not Available | Negative | 1542745 - 1543923 | 41962.0 |
| methionine--trna ligase | YT1_RS08340 | Not Available | Negative | 1543964 - 1545511 | 57695.1 |
| tatd family hydrolase | YT1_RS08345 | Not Available | Positive | 1545548 - 1546378 | 29453.8 |
| maleylacetate reductase | YT1_RS08350 | Not Available | Positive | 1546423 - 1547490 | 36861.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


