Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | YT1_RS08210 | Not Available | Negative | 1515757 - 1516362 | 21159.1 |
| utp--glucose-1-phosphate uridylyltransferase | YT1_RS08215 | Not Available | Positive | 1516424 - 1517335 | 32085.5 |
| gephyrin-like molybdotransferase glp | YT1_RS08220 | Not Available | Positive | 1517368 - 1518627 | 43965.0 |
| gnat family n-acetyltransferase | YT1_RS08225 | Not Available | Positive | 1518627 - 1519262 | 23404.4 |
| gephyrin-like molybdotransferase receptor glpr | YT1_RS08230 | Not Available | Positive | 1519488 - 1520336 | 32218.0 |
| class i sam-dependent methyltransferase | YT1_RS08235 | Not Available | Negative | 1520359 - 1521150 | 28152.4 |
| luxr c-terminal-related transcriptional regulator | YT1_RS27810 | Not Available | Negative | 1521147 - 1522796 | 57742.6 |
| Trna-ala | Not Available | Not Available | Positive | 1522896 - 1522971 | Not Available |
| hypothetical protein | YT1_RS27120 | Not Available | Positive | 1523082 - 1523225 | 5509.36 |
| sdr family oxidoreductase | YT1_RS08250 | Not Available | Positive | 1523338 - 1524198 | 31006.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


