Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | YT1_RS07970 | Not Available | Positive | 1467081 - 1467686 | 20928.9 |
| acyl-coa dehydrogenase family protein | YT1_RS07975 | Not Available | Positive | 1467683 - 1469317 | 59279.9 |
| fad:protein fmn transferase | YT1_RS07980 | Not Available | Positive | 1469428 - 1470243 | 28606.3 |
| glucose-6-phosphate isomerase | YT1_RS07985 | Not Available | Negative | 1470331 - 1471965 | 58036.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | YT1_RS07990 | Not Available | Positive | 1472045 - 1473496 | 50994.8 |
| chorismate mutase | YT1_RS07995 | Not Available | Negative | 1473630 - 1473938 | 11101.3 |
| dna helicase pcra | YT1_RS08000 | Not Available | Positive | 1474228 - 1476666 | 88328.2 |
| m23 family metallopeptidase | YT1_RS08005 | Not Available | Negative | 1476731 - 1477774 | 36329.0 |
| hypothetical protein | YT1_RS08010 | Not Available | Positive | 1478001 - 1479710 | 54152.9 |
| adp-forming succinate--coa ligase subunit beta | YT1_RS08015 | Not Available | Positive | 1479854 - 1481023 | 41030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


