Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe dioxygenase family protein | YT1_RS07920 | Not Available | Positive | 1457360 - 1458118 | 27363.2 |
| mfs transporter | YT1_RS07925 | Not Available | Negative | 1458081 - 1459607 | 52628.0 |
| alpha/beta family hydrolase | YT1_RS07930 | Not Available | Negative | 1459825 - 1460520 | 23702.3 |
| tellurite resistance/c4-dicarboxylate transporter family protein | YT1_RS07935 | Not Available | Negative | 1460475 - 1461530 | 38081.1 |
| fpg/nei family dna glycosylase | YT1_RS07940 | Not Available | Negative | 1461589 - 1462455 | 30975.5 |
| thymidylate synthase | YT1_RS07945 | Not Available | Positive | 1462543 - 1463337 | 29996.5 |
| dihydrofolate reductase | YT1_RS07950 | Not Available | Positive | 1463334 - 1463831 | 17564.8 |
| cupin domain-containing protein | YT1_RS07955 | Not Available | Positive | 1463891 - 1464217 | 11419.7 |
| carboxylesterase/lipase family protein | YT1_RS07960 | Not Available | Negative | 1464222 - 1465748 | 55070.0 |
| hypothetical protein | YT1_RS07965 | Not Available | Negative | 1465787 - 1467022 | 43745.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


