Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methanethiol s-methyltransferase | YT1_RS07765 | Not Available | Positive | 1430319 - 1431086 | 28766.2 |
| ynfa family protein | YT1_RS07770 | Not Available | Positive | 1431156 - 1431485 | 11558.3 |
| hypothetical protein | YT1_RS07775 | Not Available | Negative | 1431498 - 1431956 | 14567.4 |
| amidohydrolase family protein | YT1_RS07780 | Not Available | Negative | 1432106 - 1432870 | 27279.7 |
| lactate 2-monooxygenase | YT1_RS07785 | Not Available | Negative | 1432867 - 1434162 | 45617.6 |
| rhodanese-like domain-containing protein | YT1_RS07790 | Not Available | Positive | 1434363 - 1434677 | 10949.8 |
| rhodanese-like domain-containing protein | YT1_RS07795 | Not Available | Positive | 1434674 - 1435033 | 13066.9 |
| metal-sensitive transcriptional regulator | YT1_RS07800 | Not Available | Positive | 1435149 - 1435433 | 10379.5 |
| duf302 domain-containing protein | YT1_RS07805 | Not Available | Positive | 1435459 - 1435857 | 14252.3 |
| ribulose-phosphate 3-epimerase | YT1_RS07810 | Not Available | Negative | 1435975 - 1436694 | 25488.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


