Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation protein | YT1_RS07665 | Not Available | Negative | 1409907 - 1410251 | 11623.9 |
| lysr family transcriptional regulator | YT1_RS07670 | Not Available | Negative | 1410303 - 1411226 | 31528.0 |
| yybh family protein | YT1_RS07675 | Not Available | Positive | 1411325 - 1411690 | 13350.6 |
| had-ic family p-type atpase | YT1_RS07680 | Not Available | Positive | 1411755 - 1414232 | 87273.9 |
| antitoxin | YT1_RS07685 | Not Available | Positive | 1414359 - 1414643 | 9628.14 |
| antitoxin | YT1_RS07690 | Not Available | Positive | 1414799 - 1415017 | 7646.09 |
| antitoxin | YT1_RS07695 | Not Available | Positive | 1415107 - 1415295 | 6723.9 |
| universal stress protein | YT1_RS07700 | Not Available | Positive | 1415461 - 1416126 | 23653.5 |
| na+/h+ antiporter | YT1_RS07705 | Not Available | Positive | 1416221 - 1417858 | 58498.7 |
| duf4385 domain-containing protein | YT1_RS07710 | Not Available | Negative | 1417884 - 1418393 | 19389.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


