Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3618 domain-containing protein | YT1_RS07565 | Not Available | Positive | 1390067 - 1390306 | 8434.21 |
| hypothetical protein | YT1_RS07570 | Not Available | Positive | 1390464 - 1391357 | 32833.3 |
| propionyl-coa synthetase | YT1_RS07575 | Not Available | Negative | 1391392 - 1393284 | 68475.2 |
| carboxyl transferase domain-containing protein | YT1_RS07580 | Not Available | Negative | 1393412 - 1394914 | 52767.6 |
| abc transporter permease | YT1_RS07585 | Not Available | Negative | 1394975 - 1396165 | 40667.8 |
| abc transporter atp-binding protein | YT1_RS07590 | Not Available | Negative | 1396162 - 1397052 | 31466.0 |
| hypothetical protein | YT1_RS07595 | Not Available | Negative | 1397086 - 1397622 | 20261.0 |
| helix-turn-helix transcriptional regulator | YT1_RS07600 | Not Available | Negative | 1397628 - 1397918 | 10794.9 |
| rna-binding s4 domain-containing protein | YT1_RS07605 | Not Available | Negative | 1398031 - 1398405 | 13651.5 |
| abc-f family atp-binding cassette domain-containing protein | YT1_RS07610 | Not Available | Negative | 1398402 - 1400039 | 58824.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


